Paper List
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A Theoretical Framework for the Formation of Large Animal Groups: Topological Coordination, Subgroup Merging, and Velocity Inheritance
This paper addresses the core problem of how large, coordinated animal groups form in nature, challenging the classical view of gradual aggregation by...
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CONFIDE: Hallucination Assessment for Reliable Biomolecular Structure Prediction and Design
This paper addresses the critical limitation of current protein structure prediction models (like AlphaFold3) where high-confidence scores (pLDDT) can...
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Generative design and validation of therapeutic peptides for glioblastoma based on a potential target ATP5A
This paper addresses the critical bottleneck in therapeutic peptide design: how to efficiently optimize lead peptides with geometric constraints while...
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Pharmacophore-based design by learning on voxel grids
This paper addresses the computational bottleneck and limited novelty in conventional pharmacophore-based virtual screening by introducing a voxel cap...
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Human-Centred Evaluation of Text-to-Image Generation Models for Self-expression of Mental Distress: A Dataset Based on GPT-4o
This paper addresses the critical gap in evaluating how AI-generated images can effectively support cross-cultural mental distress communication, part...
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ANNE Apnea Paper
This paper addresses the core challenge of achieving accurate, event-level sleep apnea detection and characterization using a non-intrusive, multimoda...
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DeeDeeExperiment: Building an infrastructure for integrating and managing omics data analysis results in R/Bioconductor
This paper addresses the critical bottleneck of managing and organizing the growing volume of differential expression and functional enrichment analys...
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Cross-Species Antimicrobial Resistance Prediction from Genomic Foundation Models
This paper addresses the core challenge of predicting antimicrobial resistance across phylogenetically distinct bacterial species, where traditional m...
An AI Implementation Science Study to Improve Trustworthy Data in a Large Healthcare System
Georgia Institute of Technology, Atlanta, GA, USA | Shriners Hospitals for Children, Tampa, FL, USA
30秒速读
IN SHORT: This paper addresses the critical gap between theoretical AI research and real-world clinical implementation by providing a practical framework for assessing and improving healthcare data quality using trustworthy AI principles.
核心创新
- Methodology Developed a Python-based extension of OHDSI's Data Quality Dashboard (DQD) that integrates the METRIC framework for trustworthy AI assessment, addressing informative missingness, timeliness, and distribution consistency.
- Methodology Implemented a real-world case study modernizing a large pediatric healthcare system's Research Data Warehouse from OMOP CDM v5.1/5.2 to v5.4 within Microsoft Fabric, achieving 4% improvement in data quality test success rate (84.78% to 88.88%).
- Biology Demonstrated that data harmonization using OMOP CDM concept codes does not significantly impact AI model performance (mean AUROC: 71.3% with source codes vs. 70.0% with OMOP codes) while increasing interoperability for Craniofacial Microsomia case study.
主要结论
- Modernizing SC's OMOP CDM database from v5.1/5.2 to v5.4 improved overall data quality by 4% (84.78% to 88.88% success rate) and conformance by 8% (80.73% to 88.09%).
- Data harmonization using OMOP CDM concept codes maintained comparable AI model performance (mean AUROC difference: 1.3%) while enabling better interoperability across healthcare systems.
- Only 50% of ICD-9 codes shared common mappings with ICD-10 codes, revealing significant vocabulary transition challenges that could degrade AI model performance when encountering mixed coding systems.
摘要: The rapid growth of Artificial Intelligence (AI) in healthcare has sparked interest in Trustworthy AI and AI Implementation Science, both of which are essential for accelerating clinical adoption. Yet, barriers such as strict regulations, gaps between research and clinical settings, and challenges in evaluating AI systems hinder real-world implementation. This study presents an AI implementation case study within Shriners Children’s (SC), a large multisite pediatric system, showcasing the modernization of SC’s Research Data Warehouse (RDW) to OMOP CDM v5.4 within a secure Microsoft Fabric environment. We introduce a Python-based data quality assessment tool compatible with SC’s infrastructure, an extension of OHDSI’s R/Java-based Data Quality Dashboard (DQD) that integrates Trustworthy AI principles using the METRIC framework. This extension enhances data quality evaluation by addressing informative missingness, redundancy, timeliness, and distributional consistency. We also compare systematic and case-specific AI implementation strategies for Craniofacial Microsomia (CFM) using the FHIR standard. Our contributions include a real-world evaluation of AI implementations, integration of Trustworthy AI in data quality assessment, and evidence-based insights into hybrid implementation strategies, highlighting the need to blend systematic infrastructure with use-case-driven approaches to advance AI in healthcare.