Paper List
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Discovery of a Hematopoietic Manifold in scGPT Yields a Method for Extracting Performant Algorithms from Biological Foundation Model Internals
This work addresses the core challenge of extracting reusable, interpretable, and high-performance biological algorithms from the opaque internal repr...
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MS2MetGAN: Latent-space adversarial training for metabolite–spectrum matching in MS/MS database search
This paper addresses the critical bottleneck in metabolite identification: the generation of high-quality negative training samples that are structura...
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Toward Robust, Reproducible, and Widely Accessible Intracranial Language Brain-Computer Interfaces: A Comprehensive Review of Neural Mechanisms, Hardware, Algorithms, Evaluation, Clinical Pathways and Future Directions
This review addresses the core challenge of fragmented and heterogeneous evidence that hinders the clinical translation of intracranial language BCIs,...
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Less Is More in Chemotherapy of Breast Cancer
通过纳入细胞周期时滞和竞争项,解决了现有肿瘤-免疫模型的过度简化问题,以定量比较化疗方案。
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Fold-CP: A Context Parallelism Framework for Biomolecular Modeling
This paper addresses the critical bottleneck of GPU memory limitations that restrict AlphaFold 3-like models to processing only a few thousand residue...
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Open Biomedical Knowledge Graphs at Scale: Construction, Federation, and AI Agent Access with Samyama Graph Database
This paper addresses the core pain point of fragmented biomedical data by constructing and federating large-scale, open knowledge graphs to enable sea...
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Predictive Analytics for Foot Ulcers Using Time-Series Temperature and Pressure Data
This paper addresses the critical need for continuous, real-time monitoring of diabetic foot health by developing an unsupervised anomaly detection fr...
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Hypothesis-Based Particle Detection for Accurate Nanoparticle Counting and Digital Diagnostics
This paper addresses the core challenge of achieving accurate, interpretable, and training-free nanoparticle counting in digital diagnostic assays, wh...
Towards unified brain-to-text decoding across speech production and perception
Zhejiang University | Chinese Academy of Sciences | Huashan Hospital, Fudan University
30秒速读
IN SHORT: This paper addresses the core challenge of developing a unified brain-to-text decoding framework that works across both speech production and perception modalities for Mandarin Chinese, overcoming limitations of single-modality approaches and alphabetic language systems.
核心创新
- Methodology First unified brain-to-sentence decoding framework for both speech production and perception in Mandarin Chinese, enabling direct comparison of neural dynamics across modalities.
- Methodology Three-stage post-training and two-stage inference framework for 7B-parameter LLM that outperforms larger commercial LLMs (hundreds of billions of parameters) in mapping toneless Pinyin syllables to Chinese sentences.
- Biology Revealed neural characteristics of Mandarin speech: production engages broader cortical regions than perception; shared channels show similar patterns with perception delayed by ~106.5ms; comparable decoding performance across hemispheres.
主要结论
- Achieved best-case Chinese character error rates of 14.71% for spoken sentences and 21.80% for heard sentences across 12 participants with depth electrodes (mean speaking CER = 31.52%, mean listening CER = 37.28%).
- NeuroSketch (2D-CNN) achieved mean initial/final accuracies of 59.54%/50.17% for speaking and 58.92%/48.05% for listening, representing 394.9%/412.0% and 389.7%/406.6% improvements over chance respectively.
- Speech production involved neural responses across broader cortical regions than auditory perception (p<0.05), with perception showing consistent temporal delay relative to production (mean = -106.5ms, 90% CI [-249.4, 23.05]).
摘要: Speech production and perception constitute two fundamental and distinct modes of human communication. Prior brain-to-text decoding studies have largely focused on a single modality and alphabetic languages. Here, we present a unified brain-to-sentence decoding framework for both speech production and perception in Mandarin Chinese. The framework exhibits strong generalization ability, enabling sentence-level decoding when trained only on single-character data and supporting characters and syllables unseen during training. In addition, it allows direct and controlled comparison of neural dynamics across modalities. We collected neural data from 12 participants implanted with depth electrodes and achieved full-sentence decoding across multiple participants, with best-case Chinese character error rates of 14.71% for spoken sentences and 21.80% for heard sentences. Mandarin speech is decoded by first classifying syllable components in Hanyu Pinyin, namely initials and finals, from neural signals, followed by a post-trained large language model (LLM) that maps sequences of toneless Pinyin syllables to Chinese sentences. To enhance LLM decoding, we designed a three-stage post-training and two-stage inference framework based on a 7-billion-parameter LLM, achieving overall performance that exceeds larger commercial LLMs with hundreds of billions of parameters or more. In addition, several characteristics were observed in Mandarin speech production and perception: speech production involved neural responses across broader cortical regions than auditory perception; channels responsive to both modalities exhibited similar activity patterns, with speech perception showing a temporal delay relative to production; and decoding performance was broadly comparable across hemispheres. Our work not only establishes the feasibility of a unified decoding framework but also provides insights into the neural characteristics of Mandarin speech production and perception. These advances contribute to brain-to-text decoding in logosyllabic languages and pave the way toward neural language decoding systems supporting multiple modalities.