Paper List
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Ill-Conditioning in Dictionary-Based Dynamic-Equation Learning: A Systems Biology Case Study
This paper addresses the critical challenge of numerical ill-conditioning and multicollinearity in library-based sparse regression methods (e.g., SIND...
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Hybrid eTFCE–GRF: Exact Cluster-Size Retrieval with Analytical pp-Values for Voxel-Based Morphometry
This paper addresses the computational bottleneck in voxel-based neuroimaging analysis by providing a method that delivers exact cluster-size retrieva...
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abx_amr_simulator: A simulation environment for antibiotic prescribing policy optimization under antimicrobial resistance
This paper addresses the critical challenge of quantitatively evaluating antibiotic prescribing policies under realistic uncertainty and partial obser...
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PesTwin: a biology-informed Digital Twin for enabling precision farming
This paper addresses the critical bottleneck in precision agriculture: the inability to accurately forecast pest outbreaks in real-time, leading to su...
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Equivariant Asynchronous Diffusion: An Adaptive Denoising Schedule for Accelerated Molecular Conformation Generation
This paper addresses the core challenge of generating physically plausible 3D molecular structures by bridging the gap between autoregressive methods ...
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Omics Data Discovery Agents
This paper addresses the core challenge of making published omics data computationally reusable by automating the extraction, quantification, and inte...
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Single-cell directional sensing at ultra-low chemoattractant concentrations from extreme first-passage events
This work addresses the core challenge of how a cell can rapidly and accurately determine the direction of a chemoattractant source when the signal is...
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SDSR: A Spectral Divide-and-Conquer Approach for Species Tree Reconstruction
This paper addresses the computational bottleneck in reconstructing species trees from thousands of species and multiple genes by introducing a scalab...
Linear Readout of Neural Manifolds with Continuous Variables
Department of Physics and Kempner Institute, Harvard University | Center for Computational Neuroscience, Flatiron Institute
30秒速读
IN SHORT: This paper addresses the core challenge of quantifying how the geometric structure of high-dimensional neural population activity (neural manifolds) determines the efficiency of linearly decoding continuous variables, amidst complex neural variability.
核心创新
- Theory Develops the first statistical-mechanical theory of 'regression capacity,' extending manifold capacity theory from discrete classification to continuous regression problems.
- Methodology Derives closed-form analytical formulas for regression capacity in synthetic models (e.g., spherical manifolds) and provides an instance-based estimator applicable to finite, real-world datasets.
- Biology Applies the framework to primate visual cortex data, quantitatively demonstrating a monotonic increase in linear decodability for object pose parameters (size, position) along the ventral stream (pixels → V4 → IT).
主要结论
- For synthetic spherical manifold models, regression capacity α decreases with increasing manifold dimensionality D and equivalent radius R_equiv (e.g., capacity drops as D increases for fixed R_equiv).
- In the mean-field model for point-like manifolds, capacity depends solely on the asymptotically equivalent tolerance ε_equiv = ε/(σ√(1-ρ)), where σ scales labels and ρ controls label correlations.
- Application to macaque ventral stream data shows regression capacity for object size and position increases (critical dimension N_crit decreases) from early (pixels) to late (IT) processing stages, indicating more efficient geometric organization for linear readout.
摘要: Brains and artificial neural networks compute with continuous variables such as object position or stimulus orientation. However, the complex variability in neural responses makes it difficult to link internal representational structure to task performance. We develop a statistical-mechanical theory of regression capacity that relates linear decoding efficiency of continuous variables to geometric properties of neural manifolds. Our theory handles complex neural variability and applies to real data, revealing increasing capacity for decoding object position and size along the monkey visual stream.