Paper List
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Nyxus: A Next Generation Image Feature Extraction Library for the Big Data and AI Era
This paper addresses the core pain point of efficiently extracting standardized, comparable features from massive (terabyte to petabyte-scale) biomedi...
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Topological Enhancement of Protein Kinetic Stability
This work addresses the long-standing puzzle of why knotted proteins exist by demonstrating that deep knots provide a functional advantage through enh...
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A Multi-Label Temporal Convolutional Framework for Transcription Factor Binding Characterization
This paper addresses the critical limitation of existing TF binding prediction methods that treat transcription factors as independent entities, faili...
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Social Distancing Equilibria in Games under Conventional SI Dynamics
This paper solves the core problem of proving the existence and uniqueness of Nash equilibria in finite-duration SI epidemic games, showing they are a...
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Binding Free Energies without Alchemy
This paper addresses the core bottleneck of computational expense in Absolute Binding Free Energy calculations by eliminating the need for numerous al...
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SHREC: A Spectral Embedding-Based Approach for Ab-Initio Reconstruction of Helical Molecules
This paper addresses the core bottleneck in cryo-EM helical reconstruction: eliminating the dependency on accurate initial symmetry parameter estimati...
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Budget-Sensitive Discovery Scoring: A Formally Verified Framework for Evaluating AI-Guided Scientific Selection
This paper addresses the critical gap in evaluating AI-guided scientific selection strategies under realistic budget constraints, where existing metri...
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Probabilistic Joint and Individual Variation Explained (ProJIVE) for Data Integration
This paper addresses the core challenge of accurately decomposing shared (joint) and dataset-specific (individual) sources of variation in multi-modal...
Exactly Solvable Population Model with Square-Root Growth Noise and Cell-Size Regulation
Institute for Theoretical Physics, Department of Physics, Utrecht University, Utrecht, Netherlands | Centre for Complex Systems Studies, Utrecht University, Utrecht, Netherlands
30秒速读
IN SHORT: This paper addresses the fundamental gap in understanding how microscopic growth fluctuations, specifically those with size-dependent (square-root) noise, shape population-level fitness and statistics in cell populations, providing an exactly solvable model that contrasts sharply with existing size-independent noise models.
核心创新
- Theory Demonstrates that the asymptotic population growth rate Λ is exactly equal to the mean single-cell growth rate k, independent of noise strength σ and division mechanisms, establishing square-root growth noise as neutral for long-term fitness.
- Methodology Derives exact, closed-form expressions for the steady-state snapshot cell-size distribution, showing it results from a universal one-sided exponential convolution of the deterministic inverse-square-law solution, with kernel width σ².
- Theory Proves that the mean-rescaled population size Nt/⟨Nt⟩ converges to a stationary compound Poisson–exponential distribution determined solely by the growth noise parameter σ, independent of division or partitioning noise.
主要结论
- Population growth rate Λ = k exactly, demonstrating fitness neutrality of square-root noise (contrasting with models where Λ increases with variance of size-independent noise).
- Steady-state population mean cell size shifts by -σ² (e.g., ⟨s⟩pop = 2ln2 - σ² + O(e^{-1/σ²})), while variance is modified only at order σ⁴, showing a hierarchy of decoupling.
- The coefficient of variation of total cell number saturates to √(2σ²), and the full distribution of the mean-rescaled population size is a compound Poisson–exponential, providing concrete, testable signatures.
摘要: We analyze a size-structured branching process in which individual cells grow exponentially according to a Feller square-root process and divide under general size-control mechanisms. We obtain exact expressions for the asymptotic population growth rate, the steady-state snapshot distribution of cell sizes, and the fluctuations of the total cell number. Our first result is that the population growth rate is exactly equal to the mean single-cell growth rate, for all noise strengths and for all division and size-regulation schemes that maintain size homeostasis. Thus square-root growth noise is neutral with respect to long-term fitness, in sharp contrast to models with size-independent stochastic growth rates. Second, we show that the steady-state population cell-size distribution is obtained from the deterministic inverse-square-law solution by a one-sided exponential convolution with kernel width set by the strength of growth fluctuations. Third, the mean-rescaled population size Nt/⟨Nt⟩ converges to a stationary compound Poisson–exponential distribution that depends only on growth noise. This distribution, and hence the long-time shape of population-size fluctuations, is unchanged by division-size noise or asymmetric partitioning. These results identify Feller-type exponential growth with square-root noise as an exactly solvable benchmark for stochastic growth in size-controlled populations and provide concrete signatures that distinguish it from models with size-independent growth-rate noise.