Paper List
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Evolutionarily Stable Stackelberg Equilibrium
通过要求追随者策略对突变入侵具有鲁棒性,弥合了斯塔克尔伯格领导力模型与演化稳定性之间的鸿沟。
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Recovering Sparse Neural Connectivity from Partial Measurements: A Covariance-Based Approach with Granger-Causality Refinement
通过跨多个实验会话累积协方差统计,实现从部分记录到完整神经连接性的重建。
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Atomic Trajectory Modeling with State Space Models for Biomolecular Dynamics
ATMOS通过提供一个基于SSM的高效框架,用于生物分子的原子级轨迹生成,弥合了计算昂贵的MD模拟与时间受限的深度生成模型之间的差距。
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Slow evolution towards generalism in a model of variable dietary range
通过证明是种群统计噪声(而非确定性动力学)驱动了模式形成和泛化食性的演化,解决了间接竞争下物种形成的悖论。
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Grounded Multimodal Retrieval-Augmented Drafting of Radiology Impressions Using Case-Based Similarity Search
通过将印象草稿基于检索到的历史病例,并采用明确引用和基于置信度的拒绝机制,解决放射学报告生成中的幻觉问题。
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Unified Policy–Value Decomposition for Rapid Adaptation
通过双线性分解在策略和价值函数之间共享低维目标嵌入,实现对新颖任务的零样本适应。
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Mathematical Modeling of Cancer–Bacterial Therapy: Analysis and Numerical Simulation via Physics-Informed Neural Networks
提供了一个严格的、无网格的PINN框架,用于模拟和分析细菌癌症疗法中复杂的、空间异质的相互作用。
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Sample-Efficient Adaptation of Drug-Response Models to Patient Tumors under Strong Biological Domain Shift
通过从无标记分子谱中学习可迁移表征,利用最少的临床数据实现患者药物反应的有效预测。
A mechanical bifurcation constrains the evolution of cell sheet folding in the family Volvocaceae
Département de Physique, École Normale Supérieure, Paris, France | Max Planck Institute for the Physics of Complex Systems, Dresden, Germany | Center for Systems Biology Dresden, Germany | Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany
30秒速读
IN SHORT: This paper addresses the core problem of why there is an evolutionary gap in species with intermediate cell numbers (e.g., 256 cells) in Volvocaceae, linking it to a mechanical bifurcation that prevents simple inversion strategies beyond a critical size.
核心创新
- Methodology Developed a novel continuum elastic sheet model for cell sheet inversion, parameterizing cell shape changes as intrinsic curvature variations.
- Biology Identified and quantified a mechanical bifurcation (critical intrinsic curvature k1) that acts as a constraint, making inversion impossible for parameter sets extrapolated to 256+ cells.
- Theory Proposed that the evolution of complex inversion programs in Volvox (e.g., type-A/B) was a necessary adaptation to circumvent this fundamental physical constraint, linking developmental mechanics to evolutionary trajectories.
主要结论
- A mechanical bifurcation in the elastic sheet model defines a critical intrinsic curvature (k1); inversion is only possible for k > k1. Parameters for P. californica (k ≈ 2.5 ± 0.4) satisfy this.
- Allometric scaling (h ∝ N^{-1/4}, ξ ≈ 1.14 ± 0.06) and geometric extrapolation predict that for N ≥ 256 cells, the required parameters fall outside the inversion-possible regime (k < k1).
- The absence of species with ~256 cells and the evolution of complex inversion in Volvox are direct consequences of this bifurcation, demonstrating how physics can constrain evolutionary possibilities.
摘要: The processes of morphogenesis that give rise to the shapes of organs and organisms during development are often driven by mechanical instabilities. Can such mechanical bifurcations also drive or constrain the evolution of these processes in the first place? We discover an instance of these constraints in the green algae of the family Volvocaceae. During their development, their bowl-shaped embryonic cell sheet turns itself inside out. This inversion is driven by a simple wave of cell wedging in the genus Pleodorina (16–128 cells) and more complex programmes of cell shape changes in Volvox (∼400–50 000 cells). However, no species with intermediate cell numbers (256 cells) have been described. Here, we relate this gap to a mechanical bifurcation: Focusing on the inversion of Pleodorina californica (64 cells), we develop a continuum model, in which the cell shape changes driving inversion appear as changes of the intrinsic curvature of an elastic surface. A mechanical bifurcation in this model predicts that inversion is only possible in a subset of its parameter space. Strikingly, parameters estimated for P. californica fall into this possible subset, but those that we extrapolate to 256 or more cells using allometric observations and a model of cell cleavage in Volvocaceae do not. Our work thus suggests that the more complex inversion strategies of Volvox are an evolutionary necessity to obviate this bifurcation and indicates more broadly how mechanical bifurcations can drive the evolution of morphogenesis.