Paper List
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Formation of Artificial Neural Assemblies by Biologically Plausible Inhibition Mechanisms
This work addresses the core limitation of the Assembly Calculus model—its fixed-size, biologically implausible k-WTA selection process—by introducing...
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How to make the most of your masked language model for protein engineering
This paper addresses the critical bottleneck of efficiently sampling high-quality, diverse protein sequences from Masked Language Models (MLMs) for pr...
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Module control in youth symptom networks across COVID-19
This paper addresses the core challenge of distinguishing whether a prolonged societal stressor (COVID-19) fundamentally reorganizes the architecture ...
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JEDI: Jointly Embedded Inference of Neural Dynamics
This paper addresses the core challenge of inferring context-dependent neural dynamics from noisy, high-dimensional recordings using a single unified ...
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ATP Level and Phosphorylation Free Energy Regulate Trigger-Wave Speed and Critical Nucleus Size in Cellular Biochemical Systems
This work addresses the core challenge of quantitatively predicting how the cellular energy state (ATP level and phosphorylation free energy) governs ...
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Packaging Jupyter notebooks as installable desktop apps using LabConstrictor
This paper addresses the core pain point of ensuring Jupyter notebook reproducibility and accessibility across different computing environments, parti...
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SNPgen: Phenotype-Supervised Genotype Representation and Synthetic Data Generation via Latent Diffusion
This paper addresses the core challenge of generating privacy-preserving synthetic genotype data that maintains both statistical fidelity and downstre...
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Continuous Diffusion Transformers for Designing Synthetic Regulatory Elements
This paper addresses the challenge of efficiently generating novel, cell-type-specific regulatory DNA sequences with high predicted activity while min...
Countershading coloration in blue shark skin emerges from hierarchically organized and spatially tuned photonic architectures inside skin denticles
City University of Hong Kong | Max Planck Institute of Colloids and Interfaces | University of Salzburg | B CUBE – Center for Molecular Bioengineering | Elasmobranch Research Belgium (ERB) | Medical University Innsbruck | AZTI, Basque Research and Technology Alliance (BRTA) | Hong Kong Polytechnic University
30秒速读
IN SHORT: This paper solves the core problem of how blue sharks achieve their striking dorsoventral countershading camouflage, revealing that coloration originates not from dermal pigments but from hierarchical photonic architectures within individual skin denticles.
核心创新
- Biology Identifies denticles as the primary optical units ('pixels') for shark skin coloration, overturning the assumption that coloration originates from underlying dermal chromatophores.
- Methodology Establishes a multi-scale correlative imaging pipeline (optical, μCT, histology, FIB-SEM, TEM) to link nanoscale crystal organization with macroscopic color gradients.
- Biology Demonstrates a spatial gradient in photonic architecture: from ordered purine-crystal stacks (blue) to disordered assemblies (white), coupled with systematic changes in chromatophore composition and pulp cavity volume (25% in blue zone vs. 17% in white zone).
主要结论
- Blue shark countershading originates from denticle-embedded photonic architectures, not dermal pigments, with pulp cavity volume decreasing from 25% (blue) to 17% (white).
- Color variation is organized hierarchically: at the microscale, blue denticles contain a tessellated reflector-absorber system (iridophores + melanophores), while white denticles lack melanophores entirely.
- At the nanoscale, ordered purine-crystal stacks (~10-60 nm features) generate narrowband blue reflection, whereas disordered assemblies produce broadband white scattering, directly linking crystal organization to optical output.
摘要: The blue shark (Prionace glauca) exhibits a striking dorsoventral color gradient, transitioning from vibrant blue dorsally to silver and white ventrally—a pattern widely interpreted as pelagic countershading. Despite its ecological significance, the physical basis of this coloration remains unresolved. Here we show that this color system does not arise from dermal chromatophores, as in most vertebrates, but from a previously unrecognised photonic architecture housed within the pulp cavity of individual dermal denticles that cover the skin. Optical imaging reveals discrete color domains within denticle crowns, while external denticle morphology remains similar across color zones. Using spectroscopy, micro-computed tomography, histology and correlative electron microscopy, we demonstrate that color variation is organized across coupled micro- and nanoscale architectures. In blue denticles, iridophores and melanophores form a densely packed tessellated reflector–absorber system within an expanded crown-restricted pulp cavity. Transition-zone denticles exhibit partial cellular layering, whereas white denticles lack melanophores and contain only reflective cells. At the nanoscale, ordered purine-crystal stacks generate narrowband blue reflection, whereas disordered assemblies produce broadband white scattering. Together, these results reveal denticles as mechanically protected optical “pixels” whose hierarchical cellular and nanocrystal organization generates the shark’s countershaded coloration.