Paper List
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Simulation and inference methods for non-Markovian stochastic biochemical reaction networks
This paper addresses the computational bottleneck of simulating and performing Bayesian inference for non-Markovian biochemical systems with history-d...
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Translating Measures onto Mechanisms: The Cognitive Relevance of Higher-Order Information
This review addresses the core challenge of translating abstract higher-order information theory metrics (e.g., synergy, redundancy) into defensible, ...
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Emergent Bayesian Behaviour and Optimal Cue Combination in LLMs
This paper addresses the critical gap in understanding whether LLMs spontaneously develop human-like Bayesian strategies for processing uncertain info...
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Vessel Network Topology in Molecular Communication: Insights from Experiments and Theory
This work addresses the critical lack of experimentally validated channel models for molecular communication within complex vessel networks, which is ...
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Modulation of DNA rheology by a transcription factor that forms aging microgels
This work addresses the fundamental question of how the transcription factor NANOG, essential for embryonic stem cell pluripotency, physically regulat...
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Imperfect molecular detection renormalizes apparent kinetic rates in stochastic gene regulatory networks
This paper addresses the core challenge of distinguishing genuine stochastic dynamics of gene regulatory networks from artifacts introduced by imperfe...
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Approximate Bayesian Inference on Mechanisms of Network Growth and Evolution
This paper addresses the core challenge of inferring the relative contributions of multiple, simultaneous generative mechanisms in network formation w...
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An AI Implementation Science Study to Improve Trustworthy Data in a Large Healthcare System
This paper addresses the critical gap between theoretical AI research and real-world clinical implementation by providing a practical framework for as...
An AI Implementation Science Study to Improve Trustworthy Data in a Large Healthcare System
Georgia Institute of Technology, Atlanta, GA, USA | Shriners Hospitals for Children, Tampa, FL, USA
The 30-Second View
IN SHORT: This paper addresses the critical gap between theoretical AI research and real-world clinical implementation by providing a practical framework for assessing and improving healthcare data quality using trustworthy AI principles.
Innovation (TL;DR)
- Methodology Developed a Python-based extension of OHDSI's Data Quality Dashboard (DQD) that integrates the METRIC framework for trustworthy AI assessment, addressing informative missingness, timeliness, and distribution consistency.
- Methodology Implemented a real-world case study modernizing a large pediatric healthcare system's Research Data Warehouse from OMOP CDM v5.1/5.2 to v5.4 within Microsoft Fabric, achieving 4% improvement in data quality test success rate (84.78% to 88.88%).
- Biology Demonstrated that data harmonization using OMOP CDM concept codes does not significantly impact AI model performance (mean AUROC: 71.3% with source codes vs. 70.0% with OMOP codes) while increasing interoperability for Craniofacial Microsomia case study.
Key conclusions
- Modernizing SC's OMOP CDM database from v5.1/5.2 to v5.4 improved overall data quality by 4% (84.78% to 88.88% success rate) and conformance by 8% (80.73% to 88.09%).
- Data harmonization using OMOP CDM concept codes maintained comparable AI model performance (mean AUROC difference: 1.3%) while enabling better interoperability across healthcare systems.
- Only 50% of ICD-9 codes shared common mappings with ICD-10 codes, revealing significant vocabulary transition challenges that could degrade AI model performance when encountering mixed coding systems.
Abstract: The rapid growth of Artificial Intelligence (AI) in healthcare has sparked interest in Trustworthy AI and AI Implementation Science, both of which are essential for accelerating clinical adoption. Yet, barriers such as strict regulations, gaps between research and clinical settings, and challenges in evaluating AI systems hinder real-world implementation. This study presents an AI implementation case study within Shriners Children’s (SC), a large multisite pediatric system, showcasing the modernization of SC’s Research Data Warehouse (RDW) to OMOP CDM v5.4 within a secure Microsoft Fabric environment. We introduce a Python-based data quality assessment tool compatible with SC’s infrastructure, an extension of OHDSI’s R/Java-based Data Quality Dashboard (DQD) that integrates Trustworthy AI principles using the METRIC framework. This extension enhances data quality evaluation by addressing informative missingness, redundancy, timeliness, and distributional consistency. We also compare systematic and case-specific AI implementation strategies for Craniofacial Microsomia (CFM) using the FHIR standard. Our contributions include a real-world evaluation of AI implementations, integration of Trustworthy AI in data quality assessment, and evidence-based insights into hybrid implementation strategies, highlighting the need to blend systematic infrastructure with use-case-driven approaches to advance AI in healthcare.